Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KRT18P68-201ENST00000392293 1000 ntBASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MIR5787-201ENST00000611784 55 ntBASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC105020.6-201ENST00000621523 1217 ntBASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-8A0A0A6YYG3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV6-8A0A0A6YYG3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC138932.1-201ENST00000534164 6830 ntBASIC13.9□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KRT8P17-201ENST00000453110 1448 ntBASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-8A0A0A6YYG3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC007322.1-201ENST00000426983 750 ntBASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CYP2T1P-201ENST00000432607 1285 ntBASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KRT16P6-202ENST00000425692 1426 ntBASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms