Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 QRSL1P3-201ENST00000552666 1316 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 SNORA70.8-201ENST00000384231 136 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 SOD1P1-201ENST00000407803 440 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 RNA5SP231-201ENST00000410496 138 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 VN1R66P-201ENST00000412929 916 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL593856.1-201ENST00000419949 805 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL354692.1-201ENST00000423044 315 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 NPM1P30-201ENST00000425092 828 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 FTH1P20-201ENST00000434913 548 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL161626.1-201ENST00000441480 490 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC079781.1-201ENST00000441505 394 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC239800.1-201ENST00000442049 719 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 IGLVI-42-201ENST00000522485 381 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL353807.4-201ENST00000604995 257 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC211433.3-201ENST00000623770 375 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 MAPK10-350ENST00000641777 965 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL163152.1-201ENST00000642001 374 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AL096816.1-201ENST00000623300 2920 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 AC063923.1-201ENST00000478982 1619 ntBASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP1Q96SZ6 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 RN7SKP174-201ENST00000363803 330 ntBASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 SNORA72.3-201ENST00000365074 132 ntBASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 AC007618.1-201ENST00000366455 732 ntBASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP1Q96SZ6 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms