Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC095059.2-201ENST00000510601 933 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 OR7E94P-202ENST00000601375 790 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 PRR13P3-201ENST00000603578 376 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 AL109936.2-201ENST00000605350 650 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 AC015849.6-201ENST00000605454 474 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 AC002094.5-201ENST00000623773 629 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VMP1Q96GC9 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VMP1Q96GC9 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VMP1Q96GC9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VMP1Q96GC9 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VMP1Q96GC9 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 BRD7P6-201ENST00000431406 1860 ntBASIC7.07□□□□□ -1.28
VMP1Q96GC9 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
VMP1Q96GC9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 SNORA30B-201ENST00000365319 129 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC008753.1-201ENST00000423096 284 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 BX119917.1-201ENST00000432517 502 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AL590399.4-201ENST00000436561 601 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 CEACAMP5-201ENST00000448037 961 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC012493.1-201ENST00000453252 760 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC013787.1-201ENST00000460165 307 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 RN7SL308P-201ENST00000464971 297 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 RN7SL58P-201ENST00000473445 294 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC026254.2-201ENST00000475295 371 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 ENPP7P3-201ENST00000509123 241 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC137549.1-201ENST00000514243 533 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 SCARNA20.1-201ENST00000516009 138 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC007136.1-201ENST00000589141 199 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 RPS28P1-201ENST00000604589 187 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC023310.4-201ENST00000613130 650 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 BX005195.1-201ENST00000618097 1198 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 PART1_3.1-201ENST00000619680 131 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 CDY11P-201ENST00000447168 1651 ntBASIC7.06□□□□□ -1.28
VMP1Q96GC9 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VMP1Q96GC9 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.06□□□□□ -1.28
VMP1Q96GC9 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 TRIM60P14-201ENST00000513444 1419 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 RNA5SP448-201ENST00000363151 111 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 SNORD15A-201ENST00000384214 148 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC226101.1-201ENST00000401483 387 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms