Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CD40P25942 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.73□□□□□ -1.33
CD40P25942 OR7E11P-202ENST00000642027 1491 ntBASIC6.73□□□□□ -1.33
CD40P25942 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 CTAGE3P-201ENST00000454280 2404 ntBASIC6.72□□□□□ -1.33
CD40P25942 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CD40P25942 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 CR788268.1-201ENST00000603931 1809 ntBASIC6.72□□□□□ -1.33
CD40P25942 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CD40P25942 RN7SKP1-201ENST00000365525 307 ntBASIC6.72□□□□□ -1.33
CD40P25942 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 FHL1-203ENST00000370676 833 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 RNU6-481P-201ENST00000384194 107 ntBASIC6.72□□□□□ -1.33
CD40P25942 SNORD65-201ENST00000391079 73 ntBASIC6.72□□□□□ -1.33
CD40P25942 RNU6-796P-201ENST00000391086 107 ntBASIC6.72□□□□□ -1.33
CD40P25942 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 ELOBP4-201ENST00000423418 296 ntBASIC6.72□□□□□ -1.33
CD40P25942 XKRYP1-201ENST00000423438 492 ntBASIC6.72□□□□□ -1.33
CD40P25942 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 BX119904.1-201ENST00000432026 348 ntBASIC6.72□□□□□ -1.33
CD40P25942 MTND2P5-201ENST00000432656 1006 ntBASIC6.72□□□□□ -1.33
CD40P25942 XKRYP2-201ENST00000432915 492 ntBASIC6.72□□□□□ -1.33
CD40P25942 AL035246.1-201ENST00000433554 1255 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.72□□□□□ -1.33
CD40P25942 AC092447.2-201ENST00000435487 669 ntBASIC6.72□□□□□ -1.33
CD40P25942 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.72□□□□□ -1.33
CD40P25942 RPL6P30-201ENST00000443382 862 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AL591719.1-201ENST00000444669 744 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC044797.1-201ENST00000445744 679 ntBASIC6.72□□□□□ -1.33
CD40P25942 AL161454.1-201ENST00000446226 569 ntBASIC6.72□□□□□ -1.33
CD40P25942 EIF2S2P2-201ENST00000447161 982 ntBASIC6.72□□□□□ -1.33
CD40P25942 RPS18P13-201ENST00000461260 454 ntBASIC6.72□□□□□ -1.33
CD40P25942 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC087385.2-201ENST00000477729 498 ntBASIC6.72□□□□□ -1.33
CD40P25942 RN7SL388P-201ENST00000498736 339 ntBASIC6.72□□□□□ -1.33
CD40P25942 FAM177A1P1-201ENST00000503598 473 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC010374.1-201ENST00000503762 1237 ntBASIC6.72□□□□□ -1.33
CD40P25942 ABCA11P-202ENST00000504019 2110 ntBASIC6.72□□□□□ -1.33
CD40P25942 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 OR7E83P-201ENST00000511021 970 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.72□□□□□ -1.33
CD40P25942 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 CHCHD3P2-201ENST00000550751 639 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC087888.1-201ENST00000550884 1254 ntBASIC6.72□□□□□ -1.33
CD40P25942 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 FDPSP3-201ENST00000556903 1013 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.72□□□□□ -1.33
CD40P25942 MIR5705-201ENST00000579870 89 ntBASIC6.72□□□□□ -1.33
CD40P25942 RN7SL237P-201ENST00000580912 287 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 AC124283.4-201ENST00000581815 456 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.72□□□□□ -1.33
CD40P25942 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD40P25942 AC099785.1-201ENST00000605697 437 ntBASIC6.72□□□□□ -1.33
CD40P25942 AL592494.3-201ENST00000609485 464 ntBASIC6.72□□□□□ -1.33
CD40P25942 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.72□□□□□ -1.33
CD40P25942 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
CD40P25942 AC120349.3-201ENST00000624377 529 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.72□□□□□ -1.33
CD40P25942 AC132825.7-201ENST00000638744 335 ntBASIC6.72□□□□□ -1.33
CD40P25942 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms