Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.78□□□□□ -1.16
UBE4BO95155 AL929410.2-201ENST00000451170 189 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 AC026826.1-201ENST00000493002 361 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.78□□□□□ -1.16
UBE4BO95155 NACAP6-201ENST00000509572 622 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 RNA5SP518-201ENST00000515957 119 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 SCARNA6-201ENST00000515982 265 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.78□□□□□ -1.16
UBE4BO95155 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
UBE4BO95155 OR7E161P-201ENST00000533722 967 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.78□□□□□ -1.16
UBE4BO95155 AC233699.1-201ENST00000569955 1168 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.78□□□□□ -1.16
UBE4BO95155 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.78□□□□□ -1.16
UBE4BO95155 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.78□□□□□ -1.16
UBE4BO95155 AL359396.1-201ENST00000623151 2376 ntBASIC7.77□□□□□ -1.16
UBE4BO95155 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.77□□□□□ -1.16
UBE4BO95155 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
UBE4BO95155 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
UBE4BO95155 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.77□□□□□ -1.17
UBE4BO95155 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
UBE4BO95155 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.77□□□□□ -1.17
UBE4BO95155 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 AC015871.3-201ENST00000618835 2261 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
UBE4BO95155 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UBE4BO95155 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 AC008753.1-201ENST00000423096 284 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 MYO5BP3-201ENST00000431872 1279 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 ATP5LP4-201ENST00000434169 307 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 RPL34P34-201ENST00000465389 354 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.77□□□□□ -1.17
UBE4BO95155 CASP1P2-201ENST00000526830 1258 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 AC079866.1-201ENST00000534985 1220 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.77□□□□□ -1.17
UBE4BO95155 RN7SL697P-201ENST00000582484 299 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 AL035417.2-201ENST00000603887 796 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 AC111186.1-201ENST00000604684 130 ntBASIC7.77□□□□□ -1.17
UBE4BO95155 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
UBE4BO95155 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
UBE4BO95155 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.76□□□□□ -1.17
UBE4BO95155 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.76□□□□□ -1.17
UBE4BO95155 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.76□□□□□ -1.17
UBE4BO95155 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
UBE4BO95155 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 AP003175.1-201ENST00000641383 6658 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 AC023886.2-201ENST00000321285 411 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 SNORA70.5-201ENST00000365519 135 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
UBE4BO95155 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.76□□□□□ -1.17
UBE4BO95155 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
UBE4BO95155 AL390728.3-201ENST00000452704 270 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.76□□□□□ -1.17
UBE4BO95155 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.76□□□□□ -1.17
UBE4BO95155 AC111000.1-201ENST00000514545 713 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 OR4C1P-201ENST00000530880 937 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 FXNP1-201ENST00000555153 337 ntBASIC7.76□□□□□ -1.17
UBE4BO95155 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms