Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 OR51P1P-201ENST00000447547 942 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 PRDX1P1-201ENST00000449329 596 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.76□□□□□ -1.33
SCN2BO60939 RPS2P25-201ENST00000467247 580 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 PGBD4P1-201ENST00000473644 407 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 RN7SL152P-201ENST00000484176 298 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 RPS4XP23-201ENST00000487801 237 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AC096754.1-201ENST00000508904 818 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 LINC01085-203ENST00000511195 326 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 PGAM4P2-201ENST00000512491 721 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.76□□□□□ -1.33
SCN2BO60939 OR7E154P-201ENST00000525174 932 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 OR5BK1P-201ENST00000550421 823 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 AC044860.3-201ENST00000559957 368 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 AC012181.2-201ENST00000570210 699 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 RN7SL667P-201ENST00000582817 298 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AC004943.1-203ENST00000624370 1074 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 AP000842.4-201ENST00000638781 748 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN2BO60939 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 AC104837.1-201ENST00000444644 1587 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 ZNF812P-201ENST00000457674 1694 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN2BO60939 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
SCN2BO60939 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SCN2BO60939 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN2BO60939 AP000866.6-201ENST00000638898 3579 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN2BO60939 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN2BO60939 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
SCN2BO60939 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.76□□□□□ -1.33
SCN2BO60939 FOLH1B-202ENST00000529567 2145 ntBASIC6.76□□□□□ -1.33
SCN2BO60939 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN2BO60939 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SCN2BO60939 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN2BO60939 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 AC130456.1-201ENST00000565085 1363 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SCN2BO60939 ARMCX7P-201ENST00000372828 562 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 MED15P9-201ENST00000424716 533 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AL121916.1-201ENST00000429405 308 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 AC108039.2-201ENST00000440214 359 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.75□□□□□ -1.33
SCN2BO60939 RPL34P22-201ENST00000468193 318 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC6.75□□□□□ -1.33
SCN2BO60939 RN7SKP98-201ENST00000517070 156 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 AC090539.2-201ENST00000523425 671 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AC126177.6-201ENST00000550420 1009 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.75□□□□□ -1.33
SCN2BO60939 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AL139123.1-201ENST00000612008 430 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 MIR6762-201ENST00000613340 86 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 AC127071.1-201ENST00000624997 712 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 AL139254.2-202ENST00000641937 1156 ntBASIC6.75□□□□□ -1.33
SCN2BO60939 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
SCN2BO60939 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN2BO60939 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN2BO60939 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SCN2BO60939 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms