Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL353151.1-201ENST00000402406 604 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 PKMP3-201ENST00000405497 715 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 GEMIN2P2-201ENST00000418195 715 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 EEF1GP7-201ENST00000422983 703 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC245884.2-201ENST00000426257 404 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC074121.1-201ENST00000441836 348 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RN7SL834P-201ENST00000461450 286 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RN7SL19P-201ENST00000462522 306 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RN7SL861P-201ENST00000473793 285 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RN7SL201P-201ENST00000482306 296 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RN7SL635P-201ENST00000492123 296 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RPL7AP2-201ENST00000496515 740 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC093281.1-201ENST00000514239 549 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC120036.3-201ENST00000517826 292 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 IGKV2-29-201ENST00000521304 372 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NPIPP1-203ENST00000547107 1071 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 MIR5095-201ENST00000578844 88 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC009955.2-201ENST00000597288 542 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AL451054.3-201ENST00000611115 776 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 HLA-B-257ENST00000640094 147 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 AC087885.1-201ENST00000641910 848 ntBASIC5.35□□□□□ -1.55
AP1S3Q96PC3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
AP1S3Q96PC3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 KARSP2-201ENST00000415696 1639 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 MAPK10-344ENST00000641718 3746 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AP004289.1-201ENST00000436307 2205 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 MIR197-201ENST00000384976 75 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR2W4P-201ENST00000406496 926 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 PPIAP2-201ENST00000414143 492 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 CYP4F32P-201ENST00000426492 504 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RNF11P2-201ENST00000427702 440 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC117382.1-201ENST00000468074 730 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RN7SL798P-201ENST00000468562 301 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RPL23P10-201ENST00000468780 412 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RN7SL36P-201ENST00000469345 276 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 GSTO3P-201ENST00000504733 718 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC095059.2-201ENST00000510601 933 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 GZMB-205ENST00000526004 819 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR5F2P-201ENST00000532761 941 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 BMS1P15-201ENST00000554269 1141 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms