Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC124312.4-201ENST00000605533 310 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AL450270.1-201ENST00000606160 391 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AC243725.1-201ENST00000637164 436 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AC087565.3-203ENST00000641018 837 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 ZNF259P1-202ENST00000572422 4912 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 ZNF300P1-201ENST00000356555 1822 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 FADS2P1-201ENST00000611807 1446 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 AC013391.3-201ENST00000567484 1456 ntBASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RSPO4Q2I0M5 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PKMP3-201ENST00000405497 715 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL451046.1-201ENST00000406097 534 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 SETP15-201ENST00000412724 337 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PTP4A1P7-201ENST00000423476 514 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PPIAP32-201ENST00000449940 472 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC092001.1-201ENST00000453012 261 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL606490.6-201ENST00000453735 523 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC022730.2-201ENST00000465359 452 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 RN7SL414P-201ENST00000469545 294 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC131233.1-201ENST00000479200 955 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC084017.1-201ENST00000483240 860 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 RNU6-1129P-201ENST00000515964 104 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 RNU2-30P-201ENST00000516209 141 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 SNORD116-30-201ENST00000516468 85 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 OR4A9P-201ENST00000526326 944 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC008015.1-201ENST00000555505 465 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL356801.1-201ENST00000559320 294 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC136619.2-201ENST00000563361 631 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 FCGR1CP-201ENST00000579737 1127 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC129492.5-201ENST00000603489 315 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 BUB1P1-201ENST00000603541 607 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC008945.2-201ENST00000606056 604 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 Z98200.1-201ENST00000607298 470 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL121757.2-201ENST00000611223 313 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC138749.5-201ENST00000611461 208 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AL354976.1-201ENST00000613843 387 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 FAM27E3-202ENST00000614611 340 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC009159.3-201ENST00000615570 804 ntBASIC7.92□□□□□ -1.14
RSPO4Q2I0M5 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms