Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.68□□□□□ -1.18
RB1P06400 AC068802.1-201ENST00000603420 732 ntBASIC7.68□□□□□ -1.18
RB1P06400 AC016405.2-201ENST00000607393 312 ntBASIC7.68□□□□□ -1.18
RB1P06400 AC073263.3-201ENST00000624449 858 ntBASIC7.68□□□□□ -1.18
RB1P06400 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.68□□□□□ -1.18
RB1P06400 XRCC6P5-201ENST00000435236 1795 ntBASIC7.68□□□□□ -1.18
RB1P06400 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
RB1P06400 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RB1P06400 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 AC095038.1-201ENST00000429248 1591 ntBASIC7.67□□□□□ -1.18
RB1P06400 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.67□□□□□ -1.18
RB1P06400 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 AC006141.1-201ENST00000581917 2170 ntBASIC7.67□□□□□ -1.18
RB1P06400 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
RB1P06400 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RB1P06400 RN7SKP250-201ENST00000363924 321 ntBASIC7.67□□□□□ -1.18
RB1P06400 RNA5SP176-201ENST00000390956 110 ntBASIC7.67□□□□□ -1.18
RB1P06400 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.67□□□□□ -1.18
RB1P06400 AL079341.1-201ENST00000404701 1207 ntBASIC7.67□□□□□ -1.18
RB1P06400 AL593856.1-201ENST00000419949 805 ntBASIC7.67□□□□□ -1.18
RB1P06400 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.67□□□□□ -1.18
RB1P06400 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.67□□□□□ -1.18
RB1P06400 AC083855.1-201ENST00000440041 258 ntBASIC7.67□□□□□ -1.18
RB1P06400 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.67□□□□□ -1.18
RB1P06400 AL354714.5-201ENST00000450131 590 ntBASIC7.67□□□□□ -1.18
RB1P06400 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RB1P06400 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 AC137549.1-201ENST00000514243 533 ntBASIC7.67□□□□□ -1.18
RB1P06400 IGLVI-42-201ENST00000522485 381 ntBASIC7.67□□□□□ -1.18
RB1P06400 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.67□□□□□ -1.18
RB1P06400 AP001000.1-201ENST00000526843 742 ntBASIC7.67□□□□□ -1.18
RB1P06400 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.67□□□□□ -1.18
RB1P06400 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.67□□□□□ -1.18
RB1P06400 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.67□□□□□ -1.18
RB1P06400 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 OR4C49P-201ENST00000563891 900 ntBASIC7.67□□□□□ -1.18
RB1P06400 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.67□□□□□ -1.18
RB1P06400 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 RPS4XP21-201ENST00000603814 750 ntBASIC7.67□□□□□ -1.18
RB1P06400 AL121809.2-201ENST00000613169 341 ntBASIC7.67□□□□□ -1.18
RB1P06400 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
RB1P06400 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 CCDC162P-202ENST00000368966 6751 ntBASIC7.67□□□□□ -1.18
RB1P06400 PPBPP2-201ENST00000513150 1362 ntBASIC7.67□□□□□ -1.18
RB1P06400 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RB1P06400 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7.67□□□□□ -1.18
RB1P06400 AC036108.4-201ENST00000611654 2516 ntBASIC7.67□□□□□ -1.18
RB1P06400 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.67□□□□□ -1.18
RB1P06400 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RB1P06400 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.66□□□□□ -1.18
RB1P06400 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 AL590143.1-201ENST00000405071 138 ntBASIC7.66□□□□□ -1.18
RB1P06400 AL133260.1-201ENST00000405720 405 ntBASIC7.66□□□□□ -1.18
RB1P06400 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.66□□□□□ -1.18
RB1P06400 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 RPL12P11-201ENST00000439970 501 ntBASIC7.66□□□□□ -1.18
RB1P06400 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.66□□□□□ -1.18
RB1P06400 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 RN7SL568P-201ENST00000493069 298 ntBASIC7.66□□□□□ -1.18
RB1P06400 AC024451.1-201ENST00000508013 779 ntBASIC7.66□□□□□ -1.18
RB1P06400 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms