Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 EIF4A1P8-201ENST00000394444 1190 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 FTLP19-201ENST00000433300 394 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 UBE2V2P1-201ENST00000434717 398 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 OR3B1P-201ENST00000437536 893 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 RPS14P8-201ENST00000478778 369 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 MORF4L2P1-201ENST00000503761 858 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC233724.10-201ENST00000510454 409 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 RN7SKP34-201ENST00000516142 244 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC073581.1-201ENST00000519036 575 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 ST13P6-201ENST00000522430 1102 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC011611.6-201ENST00000547483 255 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC008126.1-201ENST00000549019 480 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC084033.1-201ENST00000550830 633 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 FXNP1-201ENST00000555153 337 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 MIR3714-201ENST00000579507 65 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 LSM1P2-201ENST00000604911 322 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 OR7M1P-201ENST00000608946 533 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AC015660.5-201ENST00000623238 564 ntBASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 KCNIP1-209ENST00000616807 1448 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P1B2RPK0 HSPD1P7-201ENST00000447985 1686 ntBASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.4□□□□□ -1.23
HMGB1P1B2RPK0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 MTCO1P7-201ENST00000419523 1542 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AL391261.1-201ENST00000555712 1479 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 RN7SKP62-201ENST00000384539 329 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 RN7SKP270-201ENST00000411297 312 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC011999.1-201ENST00000424794 1024 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 HSD17B7P2-201ENST00000471365 1033 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 IGLV3-7-201ENST00000522952 271 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AP004607.6-201ENST00000525033 1202 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AC009101.2-202ENST00000564851 490 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 MIR4327-201ENST00000581194 85 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 MIR4314-201ENST00000583321 92 ntBASIC7.39□□□□□ -1.23
HMGB1P1B2RPK0 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms