Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 MTCO1P1-201ENST00000624263 1081 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC129908.1-201ENST00000624553 648 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC022919.1-201ENST00000624979 626 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC106858.1-201ENST00000637497 429 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC099654.15-201ENST00000639802 509 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC241584.2-201ENST00000637142 2090 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 PPIAP22-201ENST00000358455 498 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 MIR106B-201ENST00000385301 82 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 NUS1P4-201ENST00000401550 585 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC231532.1-201ENST00000438584 312 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AP001960.1-201ENST00000506494 658 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 MIR3137-201ENST00000577367 75 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 RPL35AP25-201ENST00000584631 330 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC017076.1-201ENST00000607613 578 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 MIR6745-201ENST00000612694 127 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 RAB28P4-201ENST00000622233 665 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC007224.2-201ENST00000625011 510 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AP000842.4-201ENST00000638781 748 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC097634.1-201ENST00000604491 2467 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 AC016251.2-201ENST00000623393 3089 ntBASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
AMBRA1Q9C0C7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms