Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL049842.1-201ENST00000402902 1479 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC008537.3-201ENST00000623128 1881 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 HSPA9P1-201ENST00000432228 2029 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SNORD3G-201ENST00000362796 215 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 Y_RNA.303-201ENST00000364998 94 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RNU6-354P-201ENST00000383862 107 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RNU6-610P-201ENST00000384264 107 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 WRBP1-201ENST00000423352 334 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 FABP5P3-201ENST00000437960 408 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 HMGB1P26-201ENST00000452520 628 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC087501.2-201ENST00000466869 581 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC020779.1-201ENST00000478757 796 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 TUBB3P2-201ENST00000480063 232 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 GOLGA5P1-201ENST00000507317 980 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RN7SKP248-201ENST00000516278 305 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RNU6-759P-201ENST00000516740 103 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 NPM1P50-201ENST00000532878 867 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 RAB11AP2-201ENST00000545905 639 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC060814.2-201ENST00000556905 1089 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 EIF1P4-201ENST00000572664 335 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC119751.8-201ENST00000597032 156 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AL606834.2-201ENST00000602954 668 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC073387.2-201ENST00000604797 784 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SNORA35B-201ENST00000607417 129 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC007349.4-201ENST00000608114 532 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC010608.2-201ENST00000624830 470 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SEPT14P19-203ENST00000633205 211 ntBASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms