Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF840P-201ENST00000504759 1996 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC245505.2-201ENST00000553572 3055 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC018992.1-201ENST00000523778 2149 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC069222.1-201ENST00000608028 3360 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 THAP12P7-201ENST00000520248 2290 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC010886.1-201ENST00000437380 2869 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 HSPA8P11-201ENST00000508840 1898 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 RPL5P8-201ENST00000396820 815 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AL355375.1-201ENST00000405686 392 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 MTATP6P31-201ENST00000406985 692 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OR5P4P-201ENST00000424698 917 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 FDPSP6-201ENST00000425091 512 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC245047.5-201ENST00000437312 556 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC234771.3-201ENST00000454984 622 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 SNORA35.1-201ENST00000458908 128 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 RPL37AP8-201ENST00000494116 276 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC008496.1-201ENST00000509131 295 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC008417.1-201ENST00000510014 565 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC008676.3-201ENST00000521237 435 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 NDUFA3P2-201ENST00000531434 232 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 BMS1P15-201ENST00000554269 1141 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC023158.1-201ENST00000561632 1025 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 MIR1273F-201ENST00000580581 99 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC139795.3-201ENST00000606358 541 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC012467.1-201ENST00000607740 256 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AP000484.1-201ENST00000620067 1252 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC022743.1-201ENST00000624990 664 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AC073488.2-201ENST00000631903 751 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AL590396.3-201ENST00000636334 300 ntBASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP1Q96SZ6 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 HCG18-244ENST00000602516 2890 ntBASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CDK5RAP1Q96SZ6 AC090114.1-201ENST00000393266 448 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms