Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC145138.1-201ENST00000512908 2851 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RNU1-38P-201ENST00000362817 144 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RNU4-40P-201ENST00000364351 143 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RNU6-1000P-201ENST00000391066 106 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC226101.1-201ENST00000401483 387 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AL356057.1-202ENST00000402263 756 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RPSAP72-201ENST00000407020 358 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PCNPP4-201ENST00000414817 517 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC099063.2-201ENST00000446360 662 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 MTND2P32-201ENST00000521584 1038 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AP004833.3-201ENST00000531893 322 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC008555.1-201ENST00000561778 2757 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PRR13P3-201ENST00000603578 376 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SLC20A1P2-201ENST00000618036 966 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC068787.1-201ENST00000623908 691 ntBASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM48Q8IWZ4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 SNORA51.7-201ENST00000384171 134 ntBASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 NHP2P2-201ENST00000396362 460 ntBASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 IL6-202ENST00000401630 765 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM48Q8IWZ4 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms