Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC008638.2-201ENST00000503840 715 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC109811.2-201ENST00000509609 452 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 HSD3BP4-201ENST00000511509 1120 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 RN7SKP248-201ENST00000516278 305 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 SNORA70D-201ENST00000578836 135 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 GTF2IP6-201ENST00000583143 541 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC211469.1-201ENST00000604263 394 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC091193.1-201ENST00000604640 448 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC108704.1-201ENST00000611714 744 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC048380.3-201ENST00000623145 796 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 SNORA43.5-201ENST00000631270 138 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC241377.2-202ENST00000636462 997 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 CCAT2-201ENST00000630920 1752 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 AC025809.2-201ENST00000625085 1802 ntBASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RBFOX3A6NFN3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC087392.3-202ENST00000358446 1754 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 RNA5SP161-201ENST00000363871 115 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 RNA5SP149-201ENST00000364952 92 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 RN7SKP271-201ENST00000410528 320 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 TMSB10P1-201ENST00000415070 132 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 UQCRHP2-201ENST00000415651 288 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 NEK2P4-201ENST00000425793 1329 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC126124.1-201ENST00000426104 185 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 H3F3BP1-201ENST00000440551 403 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC117395.2-201ENST00000463122 1128 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 RN7SL233P-201ENST00000469988 277 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC087385.2-201ENST00000477729 498 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 RN7SL107P-201ENST00000478127 283 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AL512310.3-201ENST00000547023 1335 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC092375.1-201ENST00000550410 637 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC008033.3-201ENST00000612531 1407 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AC022743.1-201ENST00000624990 664 ntBASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.61□□□□□ -1.51
RBFOX3A6NFN3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms