Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AL353151.1-201ENST00000402406 604 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC005040.1-201ENST00000437783 482 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL233P-201ENST00000469988 277 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC068522.1-201ENST00000482895 345 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AL445187.1-201ENST00000502685 260 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 Z99943.2-201ENST00000507585 266 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 MIR3135A-201ENST00000578460 77 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 MIR5095-201ENST00000578844 88 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AC091544.5-201ENST00000620192 3815 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 AP003471.1-202ENST00000319051 1988 ntBASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCNB1IP1Q9NPC3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 WNK1-220ENST00000574564 1401 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC069222.1-201ENST00000608028 3360 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AL359195.2-201ENST00000623657 4412 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC005034.3-201ENST00000604845 1747 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RNA5SP297-201ENST00000391029 113 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 KRT18P52-201ENST00000404956 846 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 DUTP4-201ENST00000424782 475 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC007000.1-201ENST00000453064 794 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AGKP1-201ENST00000455254 1263 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL36P-201ENST00000469345 276 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL335P-201ENST00000482790 304 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL635P-201ENST00000492123 296 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL869P-201ENST00000497032 300 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SL237P-201ENST00000580912 287 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AL353608.4-201ENST00000624487 1188 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC087269.2-201ENST00000641764 975 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 KARSP2-201ENST00000415696 1639 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 AC074198.1-201ENST00000506546 1397 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms