Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC241584.2-201ENST00000637142 2090 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC104162.1-201ENST00000430831 2382 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RPL12P13-201ENST00000310055 497 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 U3.48-201ENST00000363172 216 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RNU6-1017P-201ENST00000363613 106 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RN7SKP107-201ENST00000364157 290 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SLC1A1P43005 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SLC1A1P43005 CES5AP1-201ENST00000400418 859 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC009237.9-201ENST00000414800 347 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 PPIAP30-201ENST00000415473 519 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 OR7E117P-201ENST00000422682 1112 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.51□□□□□ -1.21
SLC1A1P43005 NPM1P30-201ENST00000425092 828 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC091390.2-201ENST00000432573 374 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC079781.1-201ENST00000441505 394 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC018892.2-201ENST00000457656 693 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RN7SL834P-201ENST00000461450 286 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RN7SL223P-201ENST00000470401 294 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.51□□□□□ -1.21
SLC1A1P43005 OR7E1P-201ENST00000533891 958 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC012181.2-201ENST00000570210 699 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 RN7SL25P-201ENST00000583862 260 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC005495.1-201ENST00000586611 1211 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.51□□□□□ -1.21
SLC1A1P43005 AP001554.1-201ENST00000604533 376 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.51□□□□□ -1.21
SLC1A1P43005 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 AC004943.1-203ENST00000624370 1074 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 SAMMSON-214ENST00000641395 1264 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 AC009237.3-203ENST00000442128 3551 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SLC1A1P43005 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SLC1A1P43005 SPATA31C1-201ENST00000420021 3895 ntBASIC7.51□□□□□ -1.21
SLC1A1P43005 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.5□□□□□ -1.21
SLC1A1P43005 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SLC1A1P43005 FAM204BP-201ENST00000369171 701 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 MIR640-201ENST00000385086 96 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.5□□□□□ -1.21
SLC1A1P43005 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 RN7SL213P-201ENST00000463482 317 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 RPL5P11-201ENST00000498068 893 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC008417.1-201ENST00000510014 565 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AC020765.1-201ENST00000604296 328 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 FAM27E3-202ENST00000614611 340 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.5□□□□□ -1.21
SLC1A1P43005 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.5□□□□□ -1.21
SLC1A1P43005 AL021877.2-201ENST00000624442 10684 ntBASIC7.5□□□□□ -1.21
SLC1A1P43005 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.5□□□□□ -1.21
SLC1A1P43005 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.5□□□□□ -1.21
SLC1A1P43005 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
SLC1A1P43005 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
SLC1A1P43005 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms