Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC055733.3-201ENST00000505214 523 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOBP13765 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC005070.1-201ENST00000603744 365 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL121985.2-201ENST00000621192 555 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC116631.1-202ENST00000640984 683 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL359396.1-201ENST00000623151 2376 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 AP003175.1-201ENST00000641383 6658 ntBASIC6.46□□□□□ -1.38
HLA-DOBP13765 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOBP13765 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOBP13765 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL358913.2-201ENST00000553881 1548 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC061975.5-201ENST00000584928 1441 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 RNU6-1055P-201ENST00000391085 107 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 RNU2-5P-201ENST00000410533 180 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 SNX18P13-201ENST00000412442 529 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 OR5P4P-201ENST00000424698 917 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC008620.1-201ENST00000468453 592 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CHCHD2P7-201ENST00000508008 452 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 IGLV1-62-201ENST00000518003 441 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL049869.4-201ENST00000555669 178 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC097376.1-201ENST00000602907 997 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL355333.1-201ENST00000605632 279 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 RN7SL778P-201ENST00000607160 297 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 AP005329.3-201ENST00000609924 686 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 KARSP2-201ENST00000415696 1639 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 HCG18-244ENST00000602516 2890 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.45□□□□□ -1.38
HLA-DOBP13765 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOBP13765 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
HLA-DOBP13765 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOBP13765 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOBP13765 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOBP13765 XKRY2-202ENST00000623874 1581 ntBASIC6.44□□□□□ -1.38
HLA-DOBP13765 XKRY-202ENST00000624960 1581 ntBASIC6.44□□□□□ -1.38
HLA-DOBP13765 ZNF969P-201ENST00000510345 2341 ntBASIC6.44□□□□□ -1.38
HLA-DOBP13765 AC091544.5-201ENST00000620192 3815 ntBASIC6.44□□□□□ -1.38
HLA-DOBP13765 USP9YP3-201ENST00000434481 1766 ntBASIC6.44□□□□□ -1.38
HLA-DOBP13765 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOBP13765 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOBP13765 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOBP13765 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms