Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.54□□□□□ -1.2
SLC1A1P43005 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SLC1A1P43005 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 RNU1-38P-201ENST00000362817 144 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 AC006511.2-201ENST00000388966 660 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.53□□□□□ -1.2
SLC1A1P43005 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 PCNAP3-201ENST00000397222 778 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 OR3B1P-201ENST00000437536 893 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 GTF2F2P2-201ENST00000445825 721 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 RN7SL58P-201ENST00000473445 294 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 OR4N3P-201ENST00000559395 818 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 AC044860.3-201ENST00000559957 368 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 AL109936.2-201ENST00000605350 650 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.53□□□□□ -1.2
SLC1A1P43005 OR6L2P-201ENST00000608207 925 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 AC135068.4-201ENST00000622949 925 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 AC005839.1-201ENST00000624148 3213 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SLC1A1P43005 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.53□□□□□ -1.2
SLC1A1P43005 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
SLC1A1P43005 NBPF8-201ENST00000583271 5330 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 SPATA31C2-201ENST00000324915 3777 ntBASIC7.53□□□□□ -1.2
SLC1A1P43005 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.52□□□□□ -1.2
SLC1A1P43005 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SLC1A1P43005 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
SLC1A1P43005 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SLC1A1P43005 AL121949.2-201ENST00000403446 1548 ntBASIC7.52□□□□□ -1.2
SLC1A1P43005 FOLH1B-202ENST00000529567 2145 ntBASIC7.52□□□□□ -1.2
SLC1A1P43005 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
SLC1A1P43005 AC104837.1-201ENST00000444644 1587 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SLC1A1P43005 SNORA70.8-201ENST00000384231 136 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.52□□□□□ -1.21
SLC1A1P43005 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.52□□□□□ -1.21
SLC1A1P43005 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.52□□□□□ -1.21
SLC1A1P43005 RPS13P2-201ENST00000437890 455 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 AL591379.2-201ENST00000450223 397 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.52□□□□□ -1.21
SLC1A1P43005 RPS12P20-201ENST00000464109 380 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 RPS2P25-201ENST00000467247 580 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.52□□□□□ -1.21
SLC1A1P43005 RPS14P8-201ENST00000478778 369 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.52□□□□□ -1.21
SLC1A1P43005 AC026826.1-201ENST00000493002 361 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 SUMO2P7-201ENST00000511179 285 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 AC126177.6-201ENST00000550420 1009 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.52□□□□□ -1.21
SLC1A1P43005 COX6CP11-201ENST00000555293 229 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 AC023827.2-201ENST00000566880 1061 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 EEF1B2P1-201ENST00000567221 672 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 RN7SL667P-201ENST00000582817 298 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.52□□□□□ -1.21
SLC1A1P43005 AL023806.2-201ENST00000603042 263 ntBASIC7.52□□□□□ -1.21
SLC1A1P43005 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
SLC1A1P43005 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SLC1A1P43005 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SLC1A1P43005 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SLC1A1P43005 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms