Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TRIM51HP-202ENST00000530412 1823 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 SNRPEP5-201ENST00000425442 278 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 CHCHD4P5-201ENST00000436684 427 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 RPSAP41-201ENST00000439695 860 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 HSPD1P1-201ENST00000503199 1726 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 DCAF13P2-201ENST00000514188 555 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC089984.3-201ENST00000552838 363 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AL135978.1-201ENST00000553618 1266 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC006141.1-201ENST00000581917 2170 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC244100.4-201ENST00000617747 388 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC005899.6-201ENST00000620729 297 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 OR2A3P-202ENST00000641249 1776 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AC145207.5-201ENST00000582866 2682 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 OR2A20P-201ENST00000479887 2913 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 AC009518.3-201ENST00000438972 253 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 BMS1P11-201ENST00000442351 885 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 BMS1P9-201ENST00000457640 885 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 GAPDHP53-201ENST00000458397 924 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 RN7SKP233-201ENST00000517005 110 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 CARSP2-201ENST00000520688 277 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 AC022726.2-201ENST00000634673 547 ntBASIC8.49□□□□□ -1.05
HLA-DOAP06340 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.49□□□□□ -1.05
HLA-DOAP06340 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HLA-DOAP06340 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC091492.1-201ENST00000419844 272 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 UQCRHP1-204ENST00000424609 274 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 RPL5P4-201ENST00000434805 886 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 RPL7L1P11-201ENST00000446092 721 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC114928.1-201ENST00000446516 415 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC073476.1-201ENST00000452854 407 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 RPSAP24-201ENST00000461543 873 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms