Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC005614.1-201ENST00000598952 3653 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 AL133243.4-201ENST00000623116 3109 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC010329.1-201ENST00000593903 8328 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 CDYLP1-201ENST00000419017 1458 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 VDAC1P8-201ENST00000406025 853 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 RPL12P27-201ENST00000414870 496 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC017104.2-201ENST00000417000 321 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX3Q99909 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX3Q99909 RPS21P1-201ENST00000434479 247 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 RPL6P24-201ENST00000445338 864 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 RPL7P14-201ENST00000449851 741 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 RN7SL91P-201ENST00000469313 291 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC090589.1-201ENST00000473109 362 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 RN7SL338P-201ENST00000481467 293 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SSX3Q99909 SSX8-201ENST00000506270 579 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 NACAP1-202ENST00000519039 641 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX3Q99909 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX3Q99909 AC092133.1-201ENST00000565828 719 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX3Q99909 OOSP1P2-201ENST00000579644 351 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 RN7SL473P-201ENST00000580341 299 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX3Q99909 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX3Q99909 AC022239.4-201ENST00000602626 504 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSX3Q99909 AC012557.3-201ENST00000626439 255 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 TSHZ2-205ENST00000626626 670 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC073488.2-201ENST00000631903 751 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX3Q99909 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.29□□□□□ -1.4
SSX3Q99909 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX3Q99909 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX3Q99909 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 LINC02128-205ENST00000641755 1334 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 AC092952.1-201ENST00000397646 1209 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AL109918.1-202ENST00000406724 436 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 AC109638.1-201ENST00000417406 326 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC003071.2-201ENST00000423857 315 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 RBMY2JP-201ENST00000425544 1059 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 RPL5P6-201ENST00000425640 886 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 KATNBL1P2-201ENST00000433311 835 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 KIF3AP1-201ENST00000454055 611 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC234782.3-201ENST00000461229 433 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC023818.1-201ENST00000498379 384 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC096754.1-201ENST00000508904 818 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX3Q99909 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX3Q99909 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 OR5BK1P-201ENST00000550421 823 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 OR4F28P-201ENST00000559128 938 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX3Q99909 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms