Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 RNA5SP389-201ENST00000362610 115 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 RNA5SP226-201ENST00000362653 115 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 RNA5SP514-201ENST00000363717 111 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 MIR498-201ENST00000385134 124 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 MIR106B-201ENST00000385301 82 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CYP4F62P-201ENST00000417310 524 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 GAPDHP28-201ENST00000455134 1003 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC026336.1-201ENST00000466577 351 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AL445187.1-201ENST00000502685 260 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 OR7E129P-201ENST00000504655 968 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC112225.1-201ENST00000508230 297 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 GCSHP1-201ENST00000512554 484 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 MIR4301-201ENST00000577203 66 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC090415.1-201ENST00000581877 847 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 OR7A18P-201ENST00000600416 277 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 SLC25A6P5-202ENST00000602729 1038 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AL021807.1-201ENST00000607175 565 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC020910.4-201ENST00000612269 540 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 U1.41-201ENST00000617626 165 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC183089.2-201ENST00000637931 916 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AL662795.2-201ENST00000624252 3706 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC011008.2-201ENST00000624866 3352 ntBASIC5.41□□□□□ -1.54
AP1S3Q96PC3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S3Q96PC3 AC007993.1-201ENST00000621298 2430 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 MEST-203ENST00000378576 2180 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms