Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC50Q8IVM0 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC50Q8IVM0 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC50Q8IVM0 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 OR52B5P-204ENST00000641744 3467 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 PTMAP8-201ENST00000397729 342 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 RN7SKP225-201ENST00000410405 352 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 VN1R33P-201ENST00000411800 887 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL593856.1-201ENST00000419949 805 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 GAPDHP73-201ENST00000423411 1007 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC130472.1-201ENST00000427885 309 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 SNX18P14-201ENST00000429308 574 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC066616.1-201ENST00000486795 413 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 RN7SL608P-201ENST00000492377 279 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 HSPE1P10-201ENST00000508631 558 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC023794.3-204ENST00000510754 236 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 IGLV10-67-201ENST00000519446 325 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 BMS1P15-201ENST00000554269 1141 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 TUBAP4-201ENST00000569261 416 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC016582.3-206ENST00000636547 207 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL391380.1-201ENST00000439300 1432 ntBASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC50Q8IVM0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 SSX6-201ENST00000376932 562 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 SNORA3.1-201ENST00000408166 111 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 GEMIN2P2-201ENST00000418195 715 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 RPL24P8-201ENST00000446071 474 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 RN7SL508P-201ENST00000464472 303 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 RN7SKP233-201ENST00000517005 110 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC008677.3-201ENST00000519146 666 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 OR7A1P-201ENST00000601206 970 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CUX2P1-201ENST00000606426 298 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 AL357556.1-201ENST00000421884 1388 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms