Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 RBM22P7-201ENST00000421321 280 ntBASIC5.01□□□□□ -1.61
RPL39P62891 PSMC1P2-201ENST00000423961 1204 ntBASIC5.01□□□□□ -1.61
RPL39P62891 FDPSP1-201ENST00000424976 1071 ntBASIC5.01□□□□□ -1.61
RPL39P62891 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 CDK7P1-201ENST00000434574 693 ntBASIC5.01□□□□□ -1.61
RPL39P62891 AC104698.1-201ENST00000435671 276 ntBASIC5.01□□□□□ -1.61
RPL39P62891 CLUHP5-201ENST00000438421 774 ntBASIC5.01□□□□□ -1.61
RPL39P62891 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 KIF3AP1-201ENST00000454055 611 ntBASIC5.01□□□□□ -1.61
RPL39P62891 PSPC1P2-201ENST00000455130 225 ntBASIC5.01□□□□□ -1.61
RPL39P62891 RPL10P6-201ENST00000457497 318 ntBASIC5.01□□□□□ -1.61
RPL39P62891 RN7SL395P-201ENST00000462960 291 ntBASIC5.01□□□□□ -1.61
RPL39P62891 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AC087280.1-201ENST00000530632 1003 ntBASIC5.01□□□□□ -1.61
RPL39P62891 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AC034105.2-201ENST00000561866 238 ntBASIC5.01□□□□□ -1.61
RPL39P62891 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AC103724.4-201ENST00000605981 292 ntBASIC5.01□□□□□ -1.61
RPL39P62891 AC104184.1-201ENST00000607513 721 ntBASIC5.01□□□□□ -1.61
RPL39P62891 AC016394.1-201ENST00000608444 833 ntBASIC5.01□□□□□ -1.61
RPL39P62891 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RPL39P62891 AC125603.4-201ENST00000621942 2699 ntBASIC5.01□□□□□ -1.61
RPL39P62891 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 RBMY1A3P-201ENST00000382670 1404 ntBASIC5□□□□□ -1.61
RPL39P62891 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 WBP11P1-201ENST00000562560 1931 ntBASIC5□□□□□ -1.61
RPL39P62891 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5□□□□□ -1.61
RPL39P62891 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 RN7SKP63-201ENST00000363187 301 ntBASIC5□□□□□ -1.61
RPL39P62891 RNU1-16P-201ENST00000365477 164 ntBASIC5□□□□□ -1.61
RPL39P62891 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 RN7SKP131-201ENST00000410698 301 ntBASIC5□□□□□ -1.61
RPL39P62891 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC5□□□□□ -1.61
RPL39P62891 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 RPL24P8-201ENST00000446071 474 ntBASIC5□□□□□ -1.61
RPL39P62891 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 BZW1P1-201ENST00000454901 1240 ntBASIC5□□□□□ -1.61
RPL39P62891 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 AL031864.2-201ENST00000498507 350 ntBASIC5□□□□□ -1.61
RPL39P62891 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 PGAM4P2-201ENST00000512491 721 ntBASIC5□□□□□ -1.61
RPL39P62891 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RPL39P62891 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC5□□□□□ -1.61
RPL39P62891 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 AC027667.1-201ENST00000545814 304 ntBASIC5□□□□□ -1.61
RPL39P62891 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5□□□□□ -1.61
RPL39P62891 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC5□□□□□ -1.61
RPL39P62891 AC093063.1-201ENST00000599317 363 ntBASIC5□□□□□ -1.61
RPL39P62891 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 AC008626.1-201ENST00000604384 255 ntBASIC5□□□□□ -1.61
RPL39P62891 CUX2P1-201ENST00000606426 298 ntBASIC5□□□□□ -1.61
RPL39P62891 AC008592.5-201ENST00000607856 547 ntBASIC5□□□□□ -1.61
RPL39P62891 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC5□□□□□ -1.61
RPL39P62891 AC239600.2-201ENST00000619615 1165 ntBASIC5□□□□□ -1.61
RPL39P62891 AC073862.4-201ENST00000622982 854 ntBASIC5□□□□□ -1.61
RPL39P62891 CU638689.2-201ENST00000623809 818 ntBASIC5□□□□□ -1.61
RPL39P62891 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms