Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF736P5Y-201ENST00000451173 805 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC004692.1-201ENST00000455430 424 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 RN7SL414P-201ENST00000469545 294 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 RN7SL228P-201ENST00000470060 303 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC004263.1-201ENST00000479327 332 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC068134.3-201ENST00000513620 788 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 OR4A9P-201ENST00000526326 944 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC027369.2-201ENST00000528030 440 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AP003174.3-201ENST00000537926 516 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AGGF1P6-201ENST00000569213 976 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 MIR5192-201ENST00000579892 92 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL031429.2-201ENST00000602605 649 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC129492.5-201ENST00000603489 315 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 RPP40P2-201ENST00000603596 712 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC069431.2-201ENST00000604149 1099 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC002487.1-201ENST00000604565 994 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL353600.1-201ENST00000608148 251 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC011330.2-201ENST00000621680 635 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AP006248.3-201ENST00000623580 594 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC012557.3-201ENST00000626439 255 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 RNU6-192P-201ENST00000391253 100 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 KIF4CP-201ENST00000422742 1279 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 RPSAP62-201ENST00000432596 833 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC231532.1-201ENST00000438584 312 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CR391992.1-201ENST00000438601 394 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL451074.1-202ENST00000453762 989 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 MED28P8-201ENST00000454831 521 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL133372.1-201ENST00000493565 745 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC021001.1-201ENST00000518703 987 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 IGHV7-40-201ENST00000520963 296 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 OR4N1P-201ENST00000554847 949 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC005632.2-201ENST00000564271 828 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC133569.1-201ENST00000564327 373 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC090415.1-201ENST00000581877 847 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 RN7SL697P-201ENST00000582484 299 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC090774.2-201ENST00000584708 322 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AL606834.3-201ENST00000602615 496 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 NTAN1P1-201ENST00000603150 646 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC067773.1-201ENST00000603284 1094 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC080078.2-201ENST00000603766 501 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC018926.1-201ENST00000616335 435 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 AC083865.1-201ENST00000636634 831 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 OR5AU1-204ENST00000641822 1197 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms