Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ISY1-202ENST00000393292 988 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 GPN3P1-201ENST00000423883 535 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 RWDD4P2-201ENST00000426392 563 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 RPS24P1-201ENST00000438550 371 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC239798.1-201ENST00000449024 1176 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC007000.1-201ENST00000453064 794 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL603882.1-201ENST00000463059 681 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 RPL7P40-201ENST00000481703 745 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 RN7SL416P-201ENST00000494042 298 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 SSR3-208ENST00000496050 579 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 IGKV1D-32-201ENST00000517449 318 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AHI1-217ENST00000534469 680 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL031985.2-201ENST00000600955 480 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL137072.1-201ENST00000603444 466 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL136363.2-201ENST00000604173 851 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC006566.1-201ENST00000608943 513 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC243772.3-202ENST00000609662 1148 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC048341.3-201ENST00000619323 491 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC241585.4-201ENST00000640951 686 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL133492.1-201ENST00000617854 3955 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 MTND5P24-201ENST00000438892 1767 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 CASR-201ENST00000490131 4015 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC002090.1-201ENST00000625000 2138 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 CR383656.5-201ENST00000547616 1340 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 RNA5SP463-201ENST00000363030 120 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 RNA5SP141-201ENST00000364543 120 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 RNU6-1242P-201ENST00000391052 103 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 RN7SKP225-201ENST00000410405 352 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL161449.1-201ENST00000414531 1199 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL139415.2-201ENST00000431968 163 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC243962.1-201ENST00000441512 579 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 RN7SKP241-201ENST00000464584 291 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 RNU2-30P-201ENST00000516209 141 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC129492.5-201ENST00000603489 315 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 CGA-202ENST00000610310 615 ntTSL 3 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms