Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 FLJ42393-201ENST00000623801 2270 ntBASIC8.83□□□□□ -1
HMG20BQ9P0W2 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
HMG20BQ9P0W2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HMG20BQ9P0W2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 THAP12P3-201ENST00000456373 2266 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 EIF4A1P13-201ENST00000415667 230 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC114755.4-201ENST00000439114 443 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 RPS7P4-201ENST00000444127 582 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 RN7SL306P-201ENST00000492941 296 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC018639.1-201ENST00000492994 442 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 SSX8-201ENST00000506270 579 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 RPL7L1P7-201ENST00000509986 724 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC008417.1-201ENST00000510014 565 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 SAA3P-201ENST00000533267 365 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 OR4N3P-201ENST00000559395 818 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 RPSAP66-201ENST00000592196 606 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC135068.4-201ENST00000622949 925 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC243725.1-201ENST00000637164 436 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 AL096816.1-201ENST00000623300 2920 ntBASIC8.82□□□□□ -1
HMG20BQ9P0W2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.82□□□□□ -1
HMG20BQ9P0W2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
HMG20BQ9P0W2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 FTH1P10-202ENST00000430907 550 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC027124.1-201ENST00000440852 466 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 PABPC1P10-201ENST00000464731 381 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 NACAP6-201ENST00000509572 622 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 IGLVI-42-201ENST00000522485 381 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC090971.3-201ENST00000557871 1041 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 COX6CP16-201ENST00000603667 216 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AL121809.2-201ENST00000613169 341 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC098590.2-201ENST00000614787 281 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 MIR6883-201ENST00000614952 78 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC009283.1-201ENST00000615852 645 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC093844.1-201ENST00000514910 1361 ntBASIC8.81□□□□□ -1
HMG20BQ9P0W2 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms