Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 RNA5SP79-201ENST00000365193 109 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 MSRB1P1-201ENST00000396851 354 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 MED15P8-201ENST00000411601 545 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 EEF1GP7-201ENST00000422983 703 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 OR7E102P-201ENST00000448855 1015 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC040975.1-201ENST00000472104 316 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AP003385.2-201ENST00000524910 973 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 OR7E96P-201ENST00000530816 976 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 DNM1P31-201ENST00000564149 696 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC092133.1-201ENST00000565828 719 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC018558.5-201ENST00000565840 952 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AP005329.3-201ENST00000609924 686 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC098590.2-201ENST00000614787 281 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 PFN1P2-202ENST00000621347 397 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 AC133485.6-201ENST00000624045 688 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 MROH3P-201ENST00000435735 2676 ntBASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CCDC50Q8IVM0 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 WBP11P1-201ENST00000562560 1931 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC087045.3-201ENST00000623046 2468 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 RNU1-24P-201ENST00000364285 165 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 SNORA35-201ENST00000386104 128 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 CNN3P1-201ENST00000401596 935 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AL034372.1-201ENST00000407586 754 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AL606752.1-201ENST00000435442 666 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC114755.4-201ENST00000439114 443 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC055733.3-201ENST00000505214 523 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AF186996.3-201ENST00000509527 964 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 IGLJCOR18-201ENST00000584002 424 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 CYCSP1-201ENST00000604815 315 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC097381.3-201ENST00000608962 462 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC079456.1-201ENST00000624010 480 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 AC022743.1-201ENST00000624990 664 ntBASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC50Q8IVM0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms