Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.86□□□□□ -1.31
SUMO3P55854 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 CUL4AP1-201ENST00000514750 1863 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 CCDC162P-202ENST00000368966 6751 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 TRIM60P14-201ENST00000513444 1419 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SUMO3P55854 AL929601.4-201ENST00000613011 1341 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SUMO3P55854 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 SNORA2C-201ENST00000408564 137 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 GAPDHP46-201ENST00000424043 994 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.85□□□□□ -1.31
SUMO3P55854 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC000362.1-201ENST00000433725 425 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 Z83313.1-201ENST00000433780 718 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 LIN28AP2-201ENST00000445283 458 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 YWHABP1-201ENST00000445359 727 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 RHEBP1-201ENST00000448647 556 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 RPS2P25-201ENST00000467247 580 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 RN7SL751P-201ENST00000473281 284 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 AP001124.1-201ENST00000529628 385 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 OR7E96P-201ENST00000530816 976 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SUMO3P55854 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 RN7SL786P-201ENST00000579130 298 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.85□□□□□ -1.31
SUMO3P55854 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 CUX2P1-201ENST00000606426 298 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC135803.1-201ENST00000608748 565 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SUMO3P55854 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 TRIM51HP-202ENST00000530412 1823 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SUMO3P55854 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.85□□□□□ -1.31
SUMO3P55854 AC139426.3-201ENST00000605648 2059 ntBASIC6.85□□□□□ -1.31
SUMO3P55854 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 HSPA8P11-201ENST00000508840 1898 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SUMO3P55854 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.84□□□□□ -1.31
SUMO3P55854 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 SSX6-201ENST00000376932 562 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms