Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
ERCC3P19447 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 AL450124.1-201ENST00000376401 353 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 SNORA51.7-201ENST00000384171 134 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 MIR431-201ENST00000385266 114 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 CXADRP1-201ENST00000398098 1095 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AL353151.1-201ENST00000402406 604 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 OR5P4P-201ENST00000424698 917 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 ARMC8P1-201ENST00000443069 1289 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 MOB1AP2-201ENST00000446060 614 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 MED28P8-201ENST00000454831 521 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 RPL34P22-201ENST00000468193 318 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 NPM1P17-201ENST00000479221 602 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 CEACAMP3-202ENST00000483806 638 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AK6-204ENST00000512561 587 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 RNA5SP75-201ENST00000516841 111 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AC026407.1-201ENST00000518369 204 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 UBE2Q2P11-201ENST00000559691 205 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AC092868.3-201ENST00000560515 784 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 FRG2IP-201ENST00000563581 781 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC9.04□□□□□ -0.96
ERCC3P19447 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AL049840.6-201ENST00000604583 345 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 CXADRP3-202ENST00000617265 1100 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AL445528.2-201ENST00000620582 470 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC241377.2-202ENST00000636462 997 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AL034408.1-201ENST00000637712 664 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AC099654.8-201ENST00000637757 681 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 TMEM30CP-203ENST00000637814 1035 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 KDELC1P1-201ENST00000512118 1509 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AL591543.1-202ENST00000642095 4149 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC9.04□□□□□ -0.96
ERCC3P19447 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC9.04□□□□□ -0.96
ERCC3P19447 AP004289.1-201ENST00000436307 2205 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ERCC3P19447 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
ERCC3P19447 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 ERG-205ENST00000398910 4954 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 RPL10P16-201ENST00000325000 645 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
ERCC3P19447 RNU1-16P-201ENST00000365477 164 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 ISY1-202ENST00000393292 988 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 ST13P16-201ENST00000401760 781 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 RN7SKP199-201ENST00000410325 305 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 Z80107.1-201ENST00000436830 412 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 XKRY2-201ENST00000442362 1093 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 FO393419.1-201ENST00000443746 355 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 AL022319.1-201ENST00000458183 1167 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC9.03□□□□□ -0.96
ERCC3P19447 RN7SL145P-201ENST00000469955 296 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms