Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL390882.1-201ENST00000618821 594 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC026336.5-201ENST00000624455 738 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 SNORA10-201ENST00000384084 133 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 MIR106B-201ENST00000385301 82 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC006511.2-201ENST00000388966 660 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 FABP12P1-201ENST00000401911 322 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RPSAP44-201ENST00000406712 884 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 USP9YP11-201ENST00000427537 717 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC073508.1-201ENST00000428866 656 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL353706.1-201ENST00000436728 494 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 PSPC1P1-201ENST00000442352 665 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RPSAP49-201ENST00000445182 886 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 TPTE2P6-202ENST00000445572 1007 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 EIF2S2P2-201ENST00000447161 982 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RPS29P5-201ENST00000452777 171 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL357037.1-201ENST00000454758 322 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RN7SL308P-201ENST00000464971 297 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC009269.1-202ENST00000484381 469 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC079944.1-201ENST00000485426 495 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC106774.2-201ENST00000510266 406 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 VTA1P2-201ENST00000520205 911 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC090819.1-201ENST00000523800 1111 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AP000445.1-201ENST00000526692 741 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AP001124.1-201ENST00000529628 385 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 DNM1P33-201ENST00000565222 270 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC023825.1-201ENST00000566704 1030 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AP005136.1-201ENST00000579765 429 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AP000919.1-201ENST00000582850 985 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC000068.3-201ENST00000607934 427 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RNVU1-19-201ENST00000613023 167 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL163051.2-201ENST00000618976 735 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AL121895.2-201ENST00000619558 447 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC091304.6-201ENST00000619761 202 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC023818.2-201ENST00000623817 2304 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 ZNF887P-201ENST00000431363 1407 ntBASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.26□□□□□ -1.09
SHKBP1Q8TBC3 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL390195.2-201ENST00000564771 2023 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 KDELC1P1-201ENST00000512118 1509 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms