Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP000445.1-201ENST00000526692 741 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
ERCC3P19447 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 U1.22-201ENST00000605806 164 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RN7SL82P-201ENST00000611435 237 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 CR589904.2-201ENST00000612533 440 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RNVU1-19-201ENST00000613023 167 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RN7SL628P-201ENST00000619139 237 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 BX005040.2-201ENST00000620504 370 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 AL353898.2-201ENST00000623000 255 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC9.06□□□□□ -0.96
ERCC3P19447 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 AC026356.1-201ENST00000622688 1357 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC9.06□□□□□ -0.96
ERCC3P19447 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 AL929601.4-201ENST00000613011 1341 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 PWRN1-212ENST00000569908 1435 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
ERCC3P19447 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AL449283.1-201ENST00000602631 3403 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 HMGB3P1-201ENST00000393368 573 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 MTND4LP13-201ENST00000425022 298 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC114973.1-201ENST00000429057 632 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 GAPDHP32-201ENST00000433816 998 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AL451074.1-202ENST00000453762 989 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC022730.2-201ENST00000465359 452 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AC104629.2-201ENST00000468627 598 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AC009269.1-202ENST00000484381 469 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AC111000.1-201ENST00000514545 713 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 DCN-207ENST00000546370 586 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC010323.2-201ENST00000596405 594 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AP003476.1-201ENST00000623984 516 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AC007683.2-201ENST00000624681 714 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 AC012557.3-201ENST00000626439 255 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
ERCC3P19447 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 AC073324.1-201ENST00000425993 1435 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 ZNF887P-201ENST00000431363 1407 ntBASIC9.05□□□□□ -0.96
ERCC3P19447 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
ERCC3P19447 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
ERCC3P19447 CUL4AP1-201ENST00000514750 1863 ntBASIC9.04□□□□□ -0.96
ERCC3P19447 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms