Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 AL050303.2-201ENST00000619798 666 ntBASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB3Q9Y5G1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 TSPY6P-201ENST00000448518 926 ntBASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB3Q9Y5G1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 TCF3P1-201ENST00000423021 1937 ntBASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGB3Q9Y5G1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGB3Q9Y5G1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 KRT8P36-201ENST00000489121 1440 ntBASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 SMG8-203ENST00000578922 2178 ntBASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AL355802.2-201ENST00000402069 882 ntBASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AC073210.2-201ENST00000430369 194 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms