Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.58■□□□□ 0.24
CALYQ9NYX4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CALYQ9NYX4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CALYQ9NYX4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 PTBP1P-201ENST00000554374 1601 ntBASIC16.57■□□□□ 0.24
CALYQ9NYX4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 C2orf69P4-201ENST00000565394 541 ntBASIC16.57■□□□□ 0.24
CALYQ9NYX4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.57■□□□□ 0.24
CALYQ9NYX4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CALYQ9NYX4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 BX276092.2-201ENST00000417668 665 ntBASIC16.56■□□□□ 0.24
CALYQ9NYX4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 AL121832.2-201ENST00000610979 668 ntBASIC16.56■□□□□ 0.24
CALYQ9NYX4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.56■□□□□ 0.24
CALYQ9NYX4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CALYQ9NYX4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 AL031963.3-201ENST00000606441 850 ntBASIC16.55■□□□□ 0.24
CALYQ9NYX4 AC092666.2-201ENST00000613287 246 ntBASIC16.55■□□□□ 0.24
CALYQ9NYX4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CALYQ9NYX4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CALYQ9NYX4 KRT8P20-201ENST00000423953 1409 ntBASIC16.54■□□□□ 0.24
CALYQ9NYX4 KRT8P17-201ENST00000453110 1448 ntBASIC16.54■□□□□ 0.24
CALYQ9NYX4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CALYQ9NYX4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.54■□□□□ 0.24
CALYQ9NYX4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CALYQ9NYX4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms