Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 AC010980.2-201ENST00000587099 1412 ntBASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 AC073111.5-205ENST00000641717 521 ntBASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
ZCCHC3Q9NUD5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 AC093787.1-201ENST00000450396 207 ntBASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 AL589743.5-201ENST00000616611 1050 ntBASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC3Q9NUD5 AL691432.2-201ENST00000607222 2038 ntBASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC3Q9NUD5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 AL512625.2-201ENST00000417533 625 ntBASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC3Q9NUD5 PTBP1P-201ENST00000554374 1601 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms