Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 TERF1P5-201ENST00000477545 1207 ntBASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 AC010536.3-201ENST00000620306 533 ntBASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUCKS1Q9H1E3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 AC026185.1-201ENST00000445748 174 ntBASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUCKS1Q9H1E3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUCKS1Q9H1E3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 CNN2P6-201ENST00000439038 900 ntBASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUCKS1Q9H1E3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms