Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 HLA-J-202ENST00000469281 1241 ntBASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
COL25A1Q9BXS0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 TSPY12P-201ENST00000421279 868 ntBASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 POLD2P1-201ENST00000511220 997 ntBASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 LINC01711-201ENST00000598340 967 ntBASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 IL9RP2-201ENST00000423948 1312 ntBASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL25A1Q9BXS0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 AC004980.1-204ENST00000429707 299 ntBASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 SLC25A1P1-201ENST00000528351 927 ntBASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL25A1Q9BXS0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 SPDYE13P-201ENST00000445314 798 ntBASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.48■□□□□ 0.87
COL25A1Q9BXS0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 AL353719.1-201ENST00000566847 864 ntBASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 AL121912.1-201ENST00000603683 238 ntBASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 AL121772.3-201ENST00000610840 674 ntBASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL25A1Q9BXS0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 AP002383.4-201ENST00000442518 975 ntBASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 PMS2P7-201ENST00000506558 1336 ntBASIC20.46■□□□□ 0.87
COL25A1Q9BXS0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms