Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00477Q96M19 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00477Q96M19 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00477Q96M19 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 AC010536.3-201ENST00000620306 533 ntBASIC14.98□□□□□ -0.01
LINC00477Q96M19 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00477Q96M19 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00477Q96M19 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 ZNRF2P3-201ENST00000424200 374 ntBASIC14.97□□□□□ -0.01
LINC00477Q96M19 NTF6G-201ENST00000591094 616 ntBASIC14.97□□□□□ -0.01
LINC00477Q96M19 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00477Q96M19 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.97□□□□□ -0.01
LINC00477Q96M19 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00477Q96M19 AL691432.2-201ENST00000607222 2038 ntBASIC14.97□□□□□ -0.01
LINC00477Q96M19 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 CYP21A1P-202ENST00000354927 1481 ntBASIC14.96□□□□□ -0.01
LINC00477Q96M19 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.96□□□□□ -0.01
LINC00477Q96M19 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 AC034268.1-201ENST00000441047 882 ntBASIC14.96□□□□□ -0.01
LINC00477Q96M19 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC00477Q96M19 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00477Q96M19 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.96□□□□□ -0.02
LINC00477Q96M19 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00477Q96M19 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms