Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.77■■□□□ 1.07
LRCH3Q96II8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LRCH3Q96II8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
LRCH3Q96II8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LRCH3Q96II8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
LRCH3Q96II8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH3Q96II8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.76■■□□□ 1.07
LRCH3Q96II8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 AC137767.1-201ENST00000602918 1920 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LRCH3Q96II8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 TSPY21P-201ENST00000433481 731 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 TSPY23P-201ENST00000440136 739 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.75■■□□□ 1.07
LRCH3Q96II8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.75■■□□□ 1.07
LRCH3Q96II8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 AL138966.2-201ENST00000621997 464 ntBASIC21.75■■□□□ 1.07
LRCH3Q96II8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
LRCH3Q96II8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH3Q96II8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.74■■□□□ 1.07
LRCH3Q96II8 AC116407.4-201ENST00000623319 1061 ntBASIC21.74■■□□□ 1.07
LRCH3Q96II8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 AC005332.1-201ENST00000577698 1310 ntBASIC21.74■■□□□ 1.07
LRCH3Q96II8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH3Q96II8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 SLC25A1P4-201ENST00000567977 778 ntBASIC21.73■■□□□ 1.07
LRCH3Q96II8 AP005242.2-201ENST00000580065 1175 ntBASIC21.73■■□□□ 1.07
LRCH3Q96II8 RN7SL510P-201ENST00000581311 263 ntBASIC21.73■■□□□ 1.07
LRCH3Q96II8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 AC116050.2-201ENST00000612102 1779 ntBASIC21.73■■□□□ 1.07
LRCH3Q96II8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH3Q96II8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
LRCH3Q96II8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 MESTP1-201ENST00000404287 994 ntBASIC21.72■■□□□ 1.07
LRCH3Q96II8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.72■■□□□ 1.07
LRCH3Q96II8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.72■■□□□ 1.07
LRCH3Q96II8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.72■■□□□ 1.07
LRCH3Q96II8 CR769767.2-201ENST00000622735 460 ntBASIC21.72■■□□□ 1.07
LRCH3Q96II8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.72■■□□□ 1.07
LRCH3Q96II8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRCH3Q96II8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms