Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 AC019069.1-201ENST00000610008 1333 ntBASIC17.35■□□□□ 0.37
CPNE2Q96FN4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE2Q96FN4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 AC004854.2-201ENST00000608450 1441 ntBASIC17.34■□□□□ 0.37
CPNE2Q96FN4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE2Q96FN4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CPNE2Q96FN4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE2Q96FN4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 DPP3P2-201ENST00000416030 1696 ntBASIC17.32■□□□□ 0.36
CPNE2Q96FN4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 SMG8-203ENST00000578922 2178 ntBASIC17.32■□□□□ 0.36
CPNE2Q96FN4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE2Q96FN4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 AC090340.1-201ENST00000620778 4980 ntBASIC17.31■□□□□ 0.36
CPNE2Q96FN4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE2Q96FN4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms