Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 MCRIP2P1-201ENST00000394346 511 ntBASIC23.75■■□□□ 1.39
DDX11Q96FC9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 AC026366.1-201ENST00000488803 879 ntBASIC23.75■■□□□ 1.39
DDX11Q96FC9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 AP006294.2-201ENST00000641667 209 ntBASIC23.75■■□□□ 1.39
DDX11Q96FC9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 SMG8-203ENST00000578922 2178 ntBASIC23.75■■□□□ 1.39
DDX11Q96FC9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DDX11Q96FC9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX11Q96FC9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 AL158047.1-201ENST00000445918 881 ntBASIC23.74■■□□□ 1.39
DDX11Q96FC9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 AL589743.5-201ENST00000616611 1050 ntBASIC23.74■■□□□ 1.39
DDX11Q96FC9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX11Q96FC9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX11Q96FC9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 AC099778.1-201ENST00000568593 1911 ntBASIC23.73■■□□□ 1.39
DDX11Q96FC9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 GCSHP5-201ENST00000443090 522 ntBASIC23.73■■□□□ 1.39
DDX11Q96FC9 AP003097.1-201ENST00000530657 1135 ntBASIC23.73■■□□□ 1.39
DDX11Q96FC9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 AC142381.4-202ENST00000563973 229 ntBASIC23.73■■□□□ 1.39
DDX11Q96FC9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX11Q96FC9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX11Q96FC9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.72■■□□□ 1.39
DDX11Q96FC9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX11Q96FC9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX11Q96FC9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX11Q96FC9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX11Q96FC9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX11Q96FC9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
DDX11Q96FC9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 AFG3L1P-217ENST00000557444 2447 ntBASIC23.71■■□□□ 1.39
DDX11Q96FC9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 KRT18P68-201ENST00000392293 1000 ntBASIC23.71■■□□□ 1.39
DDX11Q96FC9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX11Q96FC9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX11Q96FC9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.7■■□□□ 1.39
DDX11Q96FC9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.39
DDX11Q96FC9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DDX11Q96FC9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DDX11Q96FC9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
DDX11Q96FC9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms