Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.18■□□□□ 0.98
TRIM11Q96F44 AC005181.1-201ENST00000604782 1256 ntBASIC21.18■□□□□ 0.98
TRIM11Q96F44 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM11Q96F44 KRT16P6-202ENST00000425692 1426 ntBASIC21.18■□□□□ 0.98
TRIM11Q96F44 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM11Q96F44 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM11Q96F44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM11Q96F44 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 HLA-G-202ENST00000376815 851 ntBASIC21.16■□□□□ 0.98
TRIM11Q96F44 HLA-G-203ENST00000376818 1127 ntBASIC21.16■□□□□ 0.98
TRIM11Q96F44 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM11Q96F44 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM11Q96F44 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 AL355472.2-201ENST00000422958 438 ntBASIC21.15■□□□□ 0.98
TRIM11Q96F44 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM11Q96F44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM11Q96F44 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TRIM11Q96F44 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM11Q96F44 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM11Q96F44 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM11Q96F44 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM11Q96F44 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TRIM11Q96F44 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM11Q96F44 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM11Q96F44 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM11Q96F44 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM11Q96F44 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM11Q96F44 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM11Q96F44 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms