Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 KRT16P4-201ENST00000453883 522 ntBASIC18.25■□□□□ 0.51
CHD6Q8TD26 POLD2P1-201ENST00000511220 997 ntBASIC18.25■□□□□ 0.51
CHD6Q8TD26 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
CHD6Q8TD26 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHD6Q8TD26 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD6Q8TD26 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD6Q8TD26 NUS1P1-201ENST00000446295 882 ntBASIC18.24■□□□□ 0.51
CHD6Q8TD26 AC142086.6-201ENST00000621154 1765 ntBASIC18.24■□□□□ 0.51
CHD6Q8TD26 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHD6Q8TD26 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 KRT18P31-201ENST00000506277 1292 ntBASIC18.24■□□□□ 0.51
CHD6Q8TD26 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD6Q8TD26 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD6Q8TD26 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHD6Q8TD26 AC092053.2-201ENST00000640557 1818 ntBASIC18.24■□□□□ 0.51
CHD6Q8TD26 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD6Q8TD26 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD6Q8TD26 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 SPDYE13P-201ENST00000445314 798 ntBASIC18.22■□□□□ 0.51
CHD6Q8TD26 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 DUSP8P4-201ENST00000399538 1761 ntBASIC18.22■□□□□ 0.51
CHD6Q8TD26 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 AP002383.4-201ENST00000442518 975 ntBASIC18.22■□□□□ 0.51
CHD6Q8TD26 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD6Q8TD26 AL353719.1-201ENST00000566847 864 ntBASIC18.22■□□□□ 0.51
CHD6Q8TD26 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD6Q8TD26 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 ZNF444P1-201ENST00000559497 298 ntBASIC18.21■□□□□ 0.51
CHD6Q8TD26 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD6Q8TD26 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD6Q8TD26 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHD6Q8TD26 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHD6Q8TD26 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.21■□□□□ 0.5
CHD6Q8TD26 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
CHD6Q8TD26 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.21■□□□□ 0.5
CHD6Q8TD26 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD6Q8TD26 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms