Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 PGM5P4-201ENST00000421970 445 ntBASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 KRT17P2-201ENST00000300992 1314 ntBASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NKX2-3Q8TAU0 AC092720.2-201ENST00000602388 1665 ntBASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.79■■□□□ 1.4
NKX2-3Q8TAU0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NKX2-3Q8TAU0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 PNMA6B-201ENST00000538162 1200 ntBASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NKX2-3Q8TAU0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 AC006557.6-201ENST00000623071 864 ntBASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 GABARAPL3-202ENST00000624044 1851 ntBASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NKX2-3Q8TAU0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 AC112907.3-201ENST00000577781 2400 ntBASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 AC092368.3-202ENST00000574180 1591 ntBASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NKX2-3Q8TAU0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms