Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTL9Q8NET4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTL9Q8NET4 KRT8P17-201ENST00000453110 1448 ntBASIC24.79■■□□□ 1.56
RTL9Q8NET4 AC005229.4-201ENST00000610085 2198 ntBASIC24.79■■□□□ 1.56
RTL9Q8NET4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTL9Q8NET4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 AL353807.1-201ENST00000427475 662 ntBASIC24.79■■□□□ 1.56
RTL9Q8NET4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 AC133561.5-201ENST00000635547 218 ntBASIC24.79■■□□□ 1.56
RTL9Q8NET4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTL9Q8NET4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTL9Q8NET4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTL9Q8NET4 AC026310.3-201ENST00000625186 2373 ntBASIC24.78■■□□□ 1.56
RTL9Q8NET4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTL9Q8NET4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTL9Q8NET4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RTL9Q8NET4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTL9Q8NET4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.77■■□□□ 1.56
RTL9Q8NET4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTL9Q8NET4 HTR7P1-201ENST00000538670 1336 ntBASIC24.76■■□□□ 1.55
RTL9Q8NET4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.76■■□□□ 1.55
RTL9Q8NET4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 AL353708.3-201ENST00000610272 989 ntBASIC24.76■■□□□ 1.55
RTL9Q8NET4 AC097493.4-201ENST00000641197 219 ntBASIC24.76■■□□□ 1.55
RTL9Q8NET4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RTL9Q8NET4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTL9Q8NET4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTL9Q8NET4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTL9Q8NET4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 RCN1P1-201ENST00000400413 996 ntBASIC24.75■■□□□ 1.55
RTL9Q8NET4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTL9Q8NET4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTL9Q8NET4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
RTL9Q8NET4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTL9Q8NET4 AC007225.1-201ENST00000566331 1836 ntBASIC24.74■■□□□ 1.55
RTL9Q8NET4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTL9Q8NET4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTL9Q8NET4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTL9Q8NET4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTL9Q8NET4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.74■■□□□ 1.55
RTL9Q8NET4 FP700111.2-201ENST00000619190 1892 ntBASIC24.74■■□□□ 1.55
RTL9Q8NET4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms