Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 AC097658.1-201ENST00000475555 843 ntBASIC16.26■□□□□ 0.19
LINC00311Q8N616 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 AL109923.1-201ENST00000618799 583 ntBASIC16.26■□□□□ 0.19
LINC00311Q8N616 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 AL691432.2-201ENST00000607222 2038 ntBASIC16.25■□□□□ 0.19
LINC00311Q8N616 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00311Q8N616 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00311Q8N616 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.25■□□□□ 0.19
LINC00311Q8N616 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 AC142086.2-201ENST00000569753 217 ntBASIC16.24■□□□□ 0.19
LINC00311Q8N616 AC005829.2-201ENST00000571422 1056 ntBASIC16.24■□□□□ 0.19
LINC00311Q8N616 AC133041.1-202ENST00000642053 222 ntBASIC16.24■□□□□ 0.19
LINC00311Q8N616 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00311Q8N616 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00311Q8N616 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AC009237.14-201ENST00000609975 1594 ntBASIC16.23■□□□□ 0.19
LINC00311Q8N616 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AL390719.1-204ENST00000412397 1219 ntBASIC16.23■□□□□ 0.19
LINC00311Q8N616 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AL138781.1-201ENST00000566567 1274 ntBASIC16.23■□□□□ 0.19
LINC00311Q8N616 AC104771.1-201ENST00000603335 964 ntBASIC16.23■□□□□ 0.19
LINC00311Q8N616 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms