Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 AC125437.2-201ENST00000625180 2167 ntBASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 AC026185.1-201ENST00000445748 174 ntBASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF549Q6P9A3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 MIR663A-201ENST00000385250 93 ntBASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF549Q6P9A3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 AL589743.5-201ENST00000616611 1050 ntBASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ZNF549Q6P9A3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 AC105036.2-201ENST00000569468 176 ntBASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 KRT8P17-201ENST00000453110 1448 ntBASIC19.85■□□□□ 0.77
ZNF549Q6P9A3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 AF201337.1-201ENST00000520239 748 ntBASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 C2orf69P4-201ENST00000565394 541 ntBASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF549Q6P9A3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms