Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 HLA-G-202ENST00000376815 851 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 HLA-G-203ENST00000376818 1127 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 RNA5SP413-201ENST00000516373 109 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 HLA-B-256ENST00000639848 1089 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC092368.3-202ENST00000574180 1591 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC073314.1-201ENST00000568729 2216 ntBASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA1Q5Y7H0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 KRT18P6-201ENST00000555540 1265 ntBASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC060766.5-201ENST00000590539 871 ntBASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA1Q5Y7H0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQA1Q5Y7H0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HLA-DQA1Q5Y7H0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 AP005212.1-201ENST00000581547 1997 ntBASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA1Q5Y7H0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC023632.3-201ENST00000521633 145 ntBASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms