Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 LINC01711-201ENST00000598340 967 ntBASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 AL121912.1-201ENST00000603683 238 ntBASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 AP002383.4-201ENST00000442518 975 ntBASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 AP000692.2-201ENST00000608391 879 ntBASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.77■■□□□ 1.24
COL13A1Q5TAT6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 AL353719.1-201ENST00000566847 864 ntBASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 AC116050.2-201ENST00000612102 1779 ntBASIC22.76■■□□□ 1.23
COL13A1Q5TAT6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 AL121772.3-201ENST00000610840 674 ntBASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 AC016734.2-201ENST00000624325 1377 ntBASIC22.75■■□□□ 1.23
COL13A1Q5TAT6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 AP003733.4-201ENST00000623785 1697 ntBASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.74■■□□□ 1.23
COL13A1Q5TAT6 AC003102.1-202ENST00000563394 1796 ntBASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 MFAP1P1-201ENST00000442257 1255 ntBASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL13A1Q5TAT6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms