Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN20Q4JDL3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 AC097658.1-201ENST00000475555 843 ntBASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN20Q4JDL3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 AC133041.1-202ENST00000642053 222 ntBASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PTPN20Q4JDL3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN20Q4JDL3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PTPN20Q4JDL3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 HLA-G-202ENST00000376815 851 ntBASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 HLA-G-203ENST00000376818 1127 ntBASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPN20Q4JDL3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms